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» DendroPy

A Python library for phylogenetic computing written by myself and Mark T. Holder.

» SumTrees

A program for the summarization of split support on phylogenetic trees (part of the DendroPy library).

» geodendron

A blog on methods and issues in phylogeography and biogeography to which I contribute.

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A selection of my photographs (*not* photographs of myself!).

» My Projects on GitHub

Public access to Git repositories of some of my projects.

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Some smaller (and generally older) public software projects.

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diff

Useful Diff Aliases

Submitted by Jeet Sukumaran on Sat, 01/14/2012 - 01:24

Add the following aliases to your '~/.bashrc' for some diff goodness:

Setting Up Git's difftool to Use Your Diff Viewer/Editor of Choice

Submitted by Jeet Sukumaran on Fri, 10/08/2010 - 20:03

Git offers two ways of viewing differences between commits, or between commits and your working tree: diff and difftool. The first of these, by default, dumps the results to the standard output. This mode of presentation is great for quick summaries of small sets of changes, but is a little cumbersome if there are a large number of changes between the two commits being compared and/or you want to closely exa